SNP Profiles of POUND 18 [POU] View Data

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	1	2	3	4	5	6	7	8	9	10	11	12	13	14
_Input profile	CT	CC	TT	CC	GG	GT	AT	AC	CC	AG	GT	AA	TT	AA
1._RUQ_874	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
2._POUND_18	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
3._POUND_18	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
4._POUND_18	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
5._POUND_18	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
6._POUND_18	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
7._POUND_18	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
8._POUND_18	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
9._POUND_18	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
10._POUND_18	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
11._RUQ_874	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
12._POUND_18	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
13._GC-08-064-1-86	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
14._GC-08-064-1-86	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
15._GC-08-064-1-86	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
16._GC-08-064-1-86	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
17._GC-08-064-1-86	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
18._GC-08-064-1-86	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
19._GC-08-064-1-86	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
20._GC-08-064-1-86	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
21._GC-08-064-1-86	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
22._GC-08-64-1-86	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_
23._RUQ_874	_	_	_	_	_	_	_	AC	_	_	_	AA	_	_

	15	16	17	18	19	20	21	22	23	24	25	26	27	28
_Input profile	AG	AA	CC	AA	CC	AC	AG	GG	TT	AC	CC	TT	AG	CC
1._RUQ_874	AG	_	_	_	_	AC	_	GG	_	AC	CC	_	_	_
2._POUND_18	_	_	_	_	_	AC	_	GG	_	AC	_	_	_	_
3._POUND_18	_	_	_	_	_	AC	_	GG	_	AC	_	_	_	_
4._POUND_18	_	_	_	_	_	AC	_	GG	_	AC	_	_	_	_
5._POUND_18	_	_	_	_	_	AC	_	GG	_	AC	_	_	_	_
6._POUND_18	_	_	_	_	_	AC	_	GG	_	AC	_	_	_	_
7._POUND_18	_	_	_	_	_	AC	_	GG	_	AC	_	_	_	_
8._POUND_18	_	_	_	_	_	AC	_	GG	_	AC	_	_	_	_
9._POUND_18	_	_	_	_	_	AC	_	GG	_	AC	_	_	_	_
10._POUND_18	_	_	_	_	_	AC	_	GG	_	AC	_	_	_	_
11._RUQ_874	_	_	_	_	_	AC	_	GG	_	AC	_	_	_	_
12._POUND_18	_	_	_	_	_	AC	_	GG	_	AC	_	_	_	_
13._GC-08-064-1-86	AG	_	_	_	_	AC	_	GG	_	AC	CC	_	_	_
14._GC-08-064-1-86	AG	_	_	_	_	AC	_	GG	_	AC	CC	_	_	_
15._GC-08-064-1-86	AG	_	_	_	_	AC	_	GG	_	AC	CC	_	_	_
16._GC-08-064-1-86	AG	_	_	_	_	AC	_	GG	_	AC	CC	_	_	_
17._GC-08-064-1-86	AG	_	_	_	_	AC	_	GG	_	AC	CC	_	_	_
18._GC-08-064-1-86	AG	_	_	_	_	AC	_	GG	_	AC	CC	_	_	_
19._GC-08-064-1-86	AG	_	_	_	_	AC	_	GG	_	AC	CC	_	_	_
20._GC-08-064-1-86	AG	_	_	_	_	AC	_	GG	_	AC	CC	_	_	_
21._GC-08-064-1-86	AG	_	_	_	_	AC	_	GG	_	AC	CC	_	_	_
22._GC-08-64-1-86	AG	_	_	_	_	AC	_	GG	_	AC	GG	_	_	_
23._RUQ_874	AG	_	_	_	_	AC	_	GG	_	AC	GG	_	_	_

	29	30	31	32	33	34	35	36	37	38	39	40	41	42
_Input profile	AA	CG	TT	GG	GG	CT	TT	AC	AT	CT	CC	GG	CC	AA
1._RUQ_874	_	_	TT	GG	GG	_	_	AC	_	_	CC	-	_	AA
2._POUND_18	AA	_	_	GG	_	_	_	_	_	_	CC	_	_	AA
3._POUND_18	AA	_	_	GG	_	_	_	_	_	_	CC	_	_	AA
4._POUND_18	AA	_	_	GG	_	_	_	_	_	_	CC	_	_	AA
5._POUND_18	AA	_	_	GG	_	_	_	_	_	_	CC	_	_	AA
6._POUND_18	AA	_	_	GG	_	_	_	_	_	_	CC	_	_	AA
7._POUND_18	AA	_	_	GG	_	_	_	_	_	_	CC	_	_	AA
8._POUND_18	AA	_	_	GG	_	_	_	_	_	_	CC	_	_	AA
9._POUND_18	AA	_	_	GG	_	_	_	_	_	_	CC	_	_	AA
10._POUND_18	AA	_	_	GG	_	_	_	_	_	_	CC	_	_	AA
11._RUQ_874	AA	_	_	GG	_	_	_	_	_	_	CC	_	_	AA
12._POUND_18	AA	_	_	GG	_	_	_	_	_	_	CC	_	_	AA
13._GC-08-064-1-86	AA	_	CC	GG	GG	_	_	AC	_	CG	CC	GG	_	AA
14._GC-08-064-1-86	AA	_	CC	GG	GG	_	_	AC	_	CG	CC	GG	_	AA
15._GC-08-064-1-86	AA	_	CC	GG	GG	_	_	AC	_	CG	CC	GG	_	AA
16._GC-08-064-1-86	AA	_	CC	GG	GG	_	_	AC	_	CG	CC	GG	_	AA
17._GC-08-064-1-86	AA	_	CC	GG	GG	_	_	AC	_	CG	CC	GG	_	AA
18._GC-08-064-1-86	AA	_	CC	GG	GG	_	_	AC	_	CG	CC	GG	_	AA
19._GC-08-064-1-86	AA	_	CC	GG	GG	_	_	AC	_	CG	CC	GG	_	AA
20._GC-08-064-1-86	AA	_	CC	GG	GG	_	_	AC	_	CG	CC	GG	_	AA
21._GC-08-064-1-86	AA	_	CC	GG	GG	_	_	AC	_	CG	CC	GG	_	AA
22._GC-08-64-1-86	_	_	_	CC	GG	_	_	AC	_	CG	GG	GG	_	AA
23._RUQ_874	_	_	_	CC	GG	_	_	AC	_	CG	GG	GG	_	AA

	43	44	45	46	47	48	49	50	51	52	53	54	55	56
_Input profile	CC	CC	AA	CC	GG	CC	CC	GG	AA	GT	GT	TT	AG	AG
1._RUQ_874	CC	_	_	_	_	_	_	_	_	GT	_	_	_	_
2._POUND_18	_	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
3._POUND_18	_	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
4._POUND_18	_	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
5._POUND_18	_	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
6._POUND_18	_	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
7._POUND_18	_	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
8._POUND_18	_	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
9._POUND_18	_	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
10._POUND_18	_	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
11._RUQ_874	_	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
12._POUND_18	_	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
13._GC-08-064-1-86	CC	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
14._GC-08-064-1-86	CC	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
15._GC-08-064-1-86	CC	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
16._GC-08-064-1-86	CC	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
17._GC-08-064-1-86	CC	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
18._GC-08-064-1-86	CC	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
19._GC-08-064-1-86	CC	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
20._GC-08-064-1-86	CC	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
21._GC-08-064-1-86	CC	_	_	_	GG	_	CC	_	_	GT	_	_	_	_
22._GC-08-64-1-86	_	_	_	_	GG	_	_	_	_	AC	_	_	_	_
23._RUQ_874	_	_	_	_	GG	_	_	_	_	AC	_	_	_	_

	57	58	59
_Input profile	CG	TT	AT	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
1._RUQ_874	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
2._POUND_18	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
3._POUND_18	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
4._POUND_18	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
5._POUND_18	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
6._POUND_18	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
7._POUND_18	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
8._POUND_18	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
9._POUND_18	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
10._POUND_18	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
11._RUQ_874	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
12._POUND_18	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
13._GC-08-064-1-86	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
14._GC-08-064-1-86	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
15._GC-08-064-1-86	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
16._GC-08-064-1-86	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
17._GC-08-064-1-86	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
18._GC-08-064-1-86	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
19._GC-08-064-1-86	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
20._GC-08-064-1-86	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
21._GC-08-064-1-86	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
22._GC-08-64-1-86	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X
23._RUQ_874	CG	_	_	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X	X_X

Input profile: POUND_18 RUQ_874

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Lambert Motilal, 2023

1._POUND_18 RUQ_874

identical
16 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2014

2._POUND_18

identical
13 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8186 9

Dapeng Zhang, 2016

3._POUND_18

identical
13 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8186 2 > FP

Dapeng Zhang, 2016

4._POUND_18

identical
13 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8186 12

Dapeng Zhang, 2016

5._POUND_18

identical
13 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8186 11

Dapeng Zhang, 2016

6._POUND_18

identical
13 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8186 7

Dapeng Zhang, 2016

7._POUND_18

identical
13 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8186 6

Dapeng Zhang, 2016

8._POUND_18

identical
13 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8186 4

Dapeng Zhang, 2016

9._POUND_18

identical
13 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8186 3

Dapeng Zhang, 2016

10._POUND_18

identical
13 shared markers

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Mars Center for Cocoa Science, Brazil

Location: 8186 1

Dapeng Zhang, 2016

Population Assignment:

Dapeng Zhang, 2016

11._POUND_18 RUQ_874

identical
13 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Dapeng Zhang, 2016

12._POUND_18

identical
13 shared markers

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International Cocoa Genebank, Trinidad (ICG,T), Trinidad and Tobago

Location: 6B F447 T2

Dapeng Zhang, 2016

13._POUND_18 GC-08-064-1-86

90.5 %
21 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 12

Notes: 12

14._POUND_18 GC-08-064-1-86

90.5 %
21 shared markers

View View all Clone Any

Mars Center for Cocoa Science, Brazil

Location: Tree: 11

Notes: 11

15._POUND_18 GC-08-064-1-86

90.5 %
21 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 9

Notes: 9

16._POUND_18 GC-08-064-1-86

90.5 %
21 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 7

Notes: 7

17._POUND_18 GC-08-064-1-86

90.5 %
21 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 6

Notes: 6

18._POUND_18 GC-08-064-1-86

90.5 %
21 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 4

Notes: 4

19._POUND_18 GC-08-064-1-86

90.5 %
21 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 3

Notes: 3

20._POUND_18 GC-08-064-1-86

90.5 %
21 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 2

Notes: 2 > FP2

21._POUND_18 GC-08-064-1-86

90.5 %
21 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Tree: 1

Notes: 1

22._POUND_18 GC-08-64-1-86

70.6 %
17 shared markers

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Mars Center for Cocoa Science, Brazil

Location: Field: 8, Block: 1, Rep: 86, Tree: 1

Notes: MCCS_Structure_refs_above_0.9membership

23._POUND_18 RUQ_874

70.6 %
17 shared markers

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International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom

Notes: Reading_Collection

Key to SNP Markers

Key to SNP Markers

1	TcSNP13	2	TcSNP19	3	TcSNP33	4	TcSNP49	5	TcSNP52
6	TcSNP131	7	TcSNP143	8	TcSNP144	9	TcSNP176	10	TcSNP189
11	TcSNP194	12	TcSNP230	13	TcSNP290	14	TcSNP305	15	TcSNP329
16	TcSNP363	17	TcSNP421	18	TcSNP519	19	TcSNP522	20	TcSNP529
21	TcSNP546	22	TcSNP577	23	TcSNP589	24	TcSNP591	25	TcSNP602
26	TcSNP640	27	TcSNP642	28	TcSNP644	29	TcSNP645	30	TcSNP660
31	TcSNP702	32	TcSNP723	33	TcSNP731	34	TcSNP739	35	TcSNP800
36	TcSNP823	37	TcSNP835	38	TcSNP836	39	TcSNP872	40	TcSNP899
41	TcSNP945	42	TcSNP998	43	TcSNP999	44	TcSNP1010	45	TcSNP1019
46	TcSNP1053	47	TcSNP1062	48	TcSNP1112	49	TcSNP1144	50	TcSNP1205
51	TcSNP1230	52	TcSNP1253	53	TcSNP1275	54	TcSNP1293	55	TcSNP1401
56	TcSNP1404	57	TcSNP1458	58	TcSNP1524	59	TcSNP1527